PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G040100.1.p
Common NamePRUPE_ppa018670mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 249aa    MW: 28225.9 Da    PI: 7.164
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G040100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH474.6e-1574125155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         ++ +hn+ Er RR++iNs ++ Lr+llP +   + kKls   +  ++v+YI +Lq
  Prupe.7G040100.1.p  74 KKLNHNASERDRRQKINSLYSSLRSLLPAD---QMKKLSIPNTISRVVKYIPELQ 125
                         6789**************************...9******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.08173124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-1274142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.52E-574129No hitNo description
PfamPF000102.7E-1274125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.18E-1474143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-979130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLALSPPSFS TIGWPLEDPK SHDQNYFYRD SFTDQIAESF LHTLPSQLPQ VEPTRSTPST  60
TVSGGYAGVS TMVKKLNHNA SERDRRQKIN SLYSSLRSLL PADQMKKLSI PNTISRVVKY  120
IPELQKQVEG LIRKREELLV RISKQEDQEL HEEKKMKSTA GTGSSLSAVS TYRLNDREVA  180
IQISTLKTHN NLLSEILLNL EEEGLQILNA SSFESSGERV FYNLHLQVER SYRLECENLS  240
EKLMSFYA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132156RKREELLVRISKQEDQELHEEKKMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007203926.10.0hypothetical protein PRUPE_ppa018670mg
TrEMBLM5WEE60.0M5WEE6_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g05300.t014e-97(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-58bHLH family protein